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zgc:195356 zgc:195356 [ Danio rerio (zebrafish) ]

Gene ID: 334679, updated on 16-Sep-2024

Summary

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Official Symbol
zgc:195356provided by ZNC
Official Full Name
zgc:195356provided by ZNC
Primary source
ZFIN:ZDB-LINCRNAG-030131-6619
See related
Ensembl:ENSDARG00000099134 AllianceGenome:ZFIN:ZDB-LINCRNAG-030131-6619
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fk50b04; wu:fj24h12; wu:fk50b04
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Genomic context

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See zgc:195356 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (36698642..36699829)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (36427384..36428571)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137490291 Neighboring gene uncharacterized LOC101885708 Neighboring gene uncharacterized LOC137490293 Neighboring gene TOX high mobility group box family member 3 Neighboring gene uncharacterized LOC137496100

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036681.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CU524145
    Related
    ENSDART00000162559.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    36698642..36699829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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