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fam43a family with sequence similarity 43 member A [ Danio rerio (zebrafish) ]

Gene ID: 334166, updated on 12-Sep-2024

Summary

Official Symbol
fam43aprovided by ZNC
Official Full Name
family with sequence similarity 43 member Aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-6098
See related
Ensembl:ENSDARG00000043009 AllianceGenome:ZFIN:ZDB-GENE-030131-6098
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fi34c08; zgc:77057; im:7152141; wu:fi34c08
Summary
Is expressed in several structures, including blood vessel; nervous system; optic primordium; optic vesicle; and solid lens vesicle. Orthologous to human FAM43A (family with sequence similarity 43 member A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See fam43a in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (34235372..34237802)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (33972940..33975370)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 44 Neighboring gene large 60S subunit nuclear export GTPase 1 Neighboring gene xyloside xylosyltransferase 1 Neighboring gene phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_214705.1NP_999870.1  protein FAM43A

    See identical proteins and their annotated locations for NP_999870.1

    Status: PROVISIONAL

    Source sequence(s)
    BC067169
    UniProtKB/TrEMBL
    A0A8M1PJU0, Q6NXA7
    Related
    ENSDARP00000063149.3, ENSDART00000063150.5
    Conserved Domains (1) summary
    pfam14719
    Location:67252
    PID_2; Phosphotyrosine interaction domain (PTB/PID)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    34235372..34237802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)