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Gm15104 predicted gene 15104 [ Mus musculus (house mouse) ]

Gene ID: 333588, updated on 22-Oct-2024

Summary

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Official Symbol
Gm15104provided by MGI
Official Full Name
predicted gene 15104provided by MGI
Primary source
MGI:MGI:3705199
See related
Ensembl:ENSMUSG00000087360 AllianceGenome:MGI:3705199
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 14.2) See more
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Genomic context

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See Gm15104 in Genome Data Viewer
Location:
X F3; X 68.46 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (149094920..149120743, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (150311924..150336719, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 20153 Neighboring gene Bmi1 polycomb ring finger oncogene pseudogene Neighboring gene methylphosphate capping enzyme pseudogene Neighboring gene VCP nuclear cofactor family member 2 Neighboring gene zinc finger CCCH type containing 14 pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chrX:146893310-146893611

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC333588

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001101501.2 → NP_001094971.1  uncharacterized protein LOC333588

    See identical proteins and their annotated locations for NP_001094971.1

    Status: VALIDATED

    Source sequence(s)
    AL844156
    Related
    ENSMUST00000132626.3
    Conserved Domains (1) summary
    pfam15549
    Location:3 → 98
    PGC7_Stella; PGC7/Stella/Dppa3 domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    149094920..149120743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006528882.4 → XP_006528945.1  uncharacterized protein LOC333588 isoform X1

    See identical proteins and their annotated locations for XP_006528945.1

    Conserved Domains (1) summary
    pfam15549
    Location:3 → 98
    PGC7_Stella; PGC7/Stella/Dppa3 domain

  2. XM_006528881.4 → XP_006528944.1  uncharacterized protein LOC333588 isoform X1

    See identical proteins and their annotated locations for XP_006528944.1

    Conserved Domains (1) summary
    pfam15549
    Location:3 → 98
    PGC7_Stella; PGC7/Stella/Dppa3 domain
Nucleotide Protein Strain
Heading Accession and Version

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