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Proser3 proline and serine rich 3 [ Mus musculus (house mouse) ]

Gene ID: 333193, updated on 28-Oct-2024

Summary

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Official Symbol
Proser3provided by MGI
Official Full Name
proline and serine rich 3provided by MGI
Primary source
MGI:MGI:2681861
See related
Ensembl:ENSMUSG00000036864 AllianceGenome:MGI:2681861
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to be located in centrosome. Orthologous to human PROSER3 (proline and serine rich 3). [provided by Alliance of Genome Resources, Oct 2024]
Expression
Ubiquitous expression in testis adult (RPKM 9.2), limb E14.5 (RPKM 7.8) and 28 other tissues See more
Orthologs
human all
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Genomic context

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See Proser3 in Genome Data Viewer
Location:
7 B1; 7 18.51 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (30238553..30251802, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (30539129..30552393, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 33, opposite strand Neighboring gene Rho GTPase activating protein 33 Neighboring gene STARR-positive B cell enhancer ABC_E1731 Neighboring gene STARR-positive B cell enhancer ABC_E9289 Neighboring gene microRNA 9769 Neighboring gene heat shock protein, alpha-crystallin-related, B6 Neighboring gene STARR-positive B cell enhancer ABC_E870 Neighboring gene lin-37 DREAM MuvB core complex component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC59495

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in centrosome ISO
Inferred from Sequence Orthology
more info
  
located_in centrosome ISS
Inferred from Sequence or Structural Similarity
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
proline and serine-rich protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001374643.1 → NP_001361572.1  proline and serine-rich protein 3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC167970
    Consensus CDS
    CCDS90202.1
    UniProtKB/TrEMBL
    A0A1L1SQ61

  2. NM_001382459.1 → NP_001369388.1  proline and serine-rich protein 3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC167970
    UniProtKB/TrEMBL
    A0A1L1SQ61
    Related
    ENSMUSP00000148912.2, ENSMUST00000215288.2

  3. NM_183321.1 → NP_899144.1  proline and serine-rich protein 3 isoform 2

    See identical proteins and their annotated locations for NP_899144.1

    Status: VALIDATED

    Source sequence(s)
    BC053749
    Consensus CDS
    CCDS21096.1
    UniProtKB/Swiss-Prot
    Q7TSA6, Q8C786
    Related
    ENSMUSP00000103800.2, ENSMUST00000108165.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    30238553..30251802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030242699.2 → XP_030098559.1  proline and serine-rich protein 3 isoform X3

  2. XM_030242698.2 → XP_030098558.1  proline and serine-rich protein 3 isoform X3

  3. XM_011250608.4 → XP_011248910.1  proline and serine-rich protein 3 isoform X1

  4. XM_017322320.3 → XP_017177809.1  proline and serine-rich protein 3 isoform X1

  5. XM_030242697.2 → XP_030098557.1  proline and serine-rich protein 3 isoform X3

  6. XM_006540124.4 → XP_006540187.1  proline and serine-rich protein 3 isoform X2

  7. XM_036153182.1 → XP_036009075.1  proline and serine-rich protein 3 isoform X4

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7TSA6.1 GenPept UniProtKB/Swiss-Prot:Q7TSA6

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