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Ir21a Ionotropic receptor 21a [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33157, updated on 18-Sep-2024

Summary

Official Symbol
Ir21aprovided by FlyBase
Official Full Name
Ionotropic receptor 21aprovided by FlyBase
Primary source
FLYBASE:FBgn0031209
Locus tag
Dmel_CG2657
See related
AllianceGenome:FB:FBgn0031209
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
21a; CG2657; CT8983; DmelIR21a; Dmel\CG2657; ir21a; IR21a
Summary
Predicted to enable ligand-gated ion channel activity and signaling receptor activity. Involved in detection of chemical stimulus involved in sensory perception. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in embryonic/larval central nervous system and sensory system. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Ir21a in Genome Data Viewer
Location:
21A4-21B1; 2-0.5 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21823..25155, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21823..25155, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene lethal (2) giant larvae Neighboring gene antisense RNA:CR43609 Neighboring gene Chitin deacetylase-like 5 Neighboring gene long non-coding RNA:CR46254 Neighboring gene long non-coding RNA:CR45339

Genomic regions, transcripts, and products

Bibliography

General protein information

Preferred Names
ionotropic receptor 21a
Names
CG2657-PB
Ir21a-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    21823..25155 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001103573.2NP_001097043.1  ionotropic receptor 21a [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097043.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VPI2
    Conserved Domains (2) summary
    pfam00060
    Location:407662
    Lig_chan; Ligand-gated ion channel
    cl21456
    Location:289583
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily