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Gm839 predicted gene 839 [ Mus musculus (house mouse) ]

Gene ID: 330379, updated on 17-Aug-2024

Summary

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Official Symbol
Gm839provided by MGI
Official Full Name
predicted gene 839provided by MGI
Primary source
MGI:MGI:2685685
See related
AllianceGenome:MGI:2685685
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward ovary adult (RPKM 1.1) See more
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Genomic context

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See Gm839 in Genome Data Viewer
Location:
6 D1; 6 39.85 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (89189179..89193161, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (89212197..89216179, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4933427D06 gene Neighboring gene STARR-seq mESC enhancer starr_16594 Neighboring gene predicted gene 1965 Neighboring gene VISTA enhancer mm1516 Neighboring gene RIKEN cDNA 4930512J16 gene Neighboring gene STARR-seq mESC enhancer starr_16595 Neighboring gene STARR-seq mESC enhancer starr_16597 Neighboring gene predicted gene, 36735 Neighboring gene STARR-positive B cell enhancer ABC_E10391 Neighboring gene STARR-seq mESC enhancer starr_16599 Neighboring gene STARR-seq mESC enhancer starr_16600 Neighboring gene plexin A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Transcriptome analysis of mouse stem cells and early embryos. Sharov AA, et al. PLoS Biol, 2003 Dec. PMID 14691545, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033190.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC147089

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    89189179..89193161 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_201356.1: Suppressed sequence

    Description
    NM_201356.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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