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CG17065 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33026, updated on 19-Jun-2024

Summary

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Official Symbol
CG17065provided by FlyBase
Primary source
FLYBASE:FBgn0031099
Locus tag
Dmel_CG17065
See related
AllianceGenome:FB:FBgn0031099
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Amdhd2; Dmel\CG17065
Summary
Predicted to enable N-acetylglucosamine-6-phosphate deacetylase activity. Predicted to be involved in N-acetylglucosamine catabolic process. Is expressed in embryonic/larval crystal cell; organism; procrystal cell; and yolk nucleus. Orthologous to human AMDHD2 (amidohydrolase domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See CG17065 in Genome Data Viewer
Location:
19C1-19C1; 1-64 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (20254692..20257199, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (20125718..20128225, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Rab10 Neighboring gene uncharacterized protein Neighboring gene Innexin 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation of microRNA targets by miRNP immunopurification. Easow G, et al. RNA, 2007 Aug. PMID 17592038, Free PMC Article
  2. Mammalian and Invertebrate Models as Complementary Tools for Gaining Mechanistic Insight on Muscle Responses to Spaceflight. Cahill T, et al. Int J Mol Sci, 2021 Aug 31. PMID 34502375, Free PMC Article
  3. Mitf is a master regulator of the v-ATPase, forming a control module for cellular homeostasis with v-ATPase and TORC1. Zhang T, et al. J Cell Sci, 2015 Aug 1. PMID 26092939, Free PMC Article
  4. Hematopoietic plasticity mapped in Drosophila and other insects. Hultmark D, et al. Elife, 2022 Aug 3. PMID 35920811, Free PMC Article
  5. Identification of genes that promote or inhibit olfactory memory formation in Drosophila. Walkinshaw E, et al. Genetics, 2015 Apr. PMID 25644700, Free PMC Article

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables N-acetylglucosamine-6-phosphate deacetylase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables N-acetylglucosamine-6-phosphate deacetylase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG17065-PA
CG17065-PB
CG17065-PD
NP_001162805.1
NP_001285488.1
NP_608380.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    20254692..20257199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298559.1 → NP_001285488.1  uncharacterized protein Dmel_CG17065, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285488.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VR81
    UniProtKB/TrEMBL
    X2JFY0
    Conserved Domains (2) summary
    COG1228
    Location:38 → 417
    HutI; Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism]
    cd00854
    Location:27 → 409
    NagA; N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to ...

  2. NM_134536.3 → NP_608380.1  uncharacterized protein Dmel_CG17065, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608380.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VR81
    UniProtKB/TrEMBL
    X2JFY0
    Related
    FBpp0077032
    Conserved Domains (2) summary
    COG1228
    Location:38 → 417
    HutI; Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism]
    cd00854
    Location:27 → 409
    NagA; N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to ...

  3. NM_001169334.1 → NP_001162805.1  uncharacterized protein Dmel_CG17065, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001162805.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1JJR9
    Conserved Domains (2) summary
    COG1228
    Location:38 → 431
    HutI; Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism]
    cd00854
    Location:27 → 423
    NagA; N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E1JJR9 E1JJR9
Q9VR81.1 Q9VR81
X2JFY0 X2JFY0

Gene LinkOut

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