GABARAP GABA type A receptor-associated protein [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: GABARAPprovided by VGNC
Official Full Name: GABA type A receptor-associated proteinprovided by VGNC
Primary source: VGNC:VGNC:29185
See related: BGD:BT10526; Ensembl:ENSBTAG00000014883
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 19

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	19	NC_037346.1 (26954140..26956071, complement)

Chromosome 19 - NC_037346.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

MARC_2791-2792:991933430:1 (e-PCR)
- UniSTS:230951

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables GABA receptor binding	IEA Inferred from Electronic Annotation more info	PubMed
enables ubiquitin protein ligase binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in autophagosome assembly	IEA Inferred from Electronic Annotation more info	PubMed
involved_in autophagy of mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cellular response to nitrogen starvation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in macroautophagy	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in autophagosome	IEA Inferred from Electronic Annotation more info	PubMed
located_in autophagosome membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: gamma-aminobutyric acid receptor-associated protein

Names: GABA(A) receptor-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001034048.1 → NP_001029220.1 gamma-aminobutyric acid receptor-associated protein

See identical proteins and their annotated locations for NP_001029220.1

Status: PROVISIONAL

Source sequence(s)

BC103060

UniProtKB/Swiss-Prot

Q3SZ82, Q9GJW7

Related

ENSBTAP00000019814.2, ENSBTAT00000019814.3

Conserved Domains (1) summary

cd17232
Location:2 → 116

Ubl_ATG8_GABARAP; ubiquitin-like (Ubl) domain found in gamma-aminobutyric acid receptor-associated protein (GABARAP)