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OdsH Ods-site homeobox [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32758, updated on 2-Nov-2024

Summary

Official Symbol
OdsHprovided by FlyBase
Official Full Name
Ods-site homeoboxprovided by FlyBase
Primary source
FLYBASE:FBgn0026058
Locus tag
Dmel_CG6352
See related
AllianceGenome:FB:FBgn0026058
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG6352; Dmel\CG6352; odsh; odsH; Odsh; OdsH[mel]
Summary
Predicted to enable sequence-specific double-stranded DNA binding activity. Involved in sexual reproduction. Located in extracellular space. Is expressed in embryonic hypopharynx; embryonic ventral epidermis; hypopharynx proper primordium; larval labral sensory complex; and ventral sensory complex primordium. Orthologous to human UNCX (UNC homeobox). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See OdsH in Genome Data Viewer
Location:
16D1-16D3; 1-58 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (17791010..17814011)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (17685043..17708044)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene raskol Neighboring gene unc-4 Neighboring gene uncharacterized protein Neighboring gene Suppressor of Cytokine Signaling at 16D

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

mobile_element

  • Loc: 17793006-17796246 mobile_element_type = transposon:flea{}152

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 
enables sequence-specific double-stranded DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of gene expression IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in sexual reproduction HEP PubMed 
Component Evidence Code Pubs
located_in extracellular space HDA PubMed 

General protein information

Preferred Names
Ods-site homeobox
Names
CG6352-PA
OdsH-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    17791010..17814011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078665.3NP_523389.3  Ods-site homeobox [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_523389.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    O96616, Q9VX20
    Related
    FBpp0074235
    Conserved Domains (1) summary
    pfam00046
    Location:162214
    Homeobox; Homeobox domain