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CG9915 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32593, updated on 22-Aug-2024

Summary

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Official Symbol
CG9915provided by FlyBase
Primary source
FLYBASE:FBgn0030738
Locus tag
Dmel_CG9915
See related
AllianceGenome:FB:FBgn0030738
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG9915
Summary
Predicted to be involved in poly(A)+ mRNA export from nucleus. Predicted to be active in nucleus. Orthologous to human IWS1 (interacts with SUPT6H, CTD assembly factor 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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Location:
14B9-14B9; 1-53 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (16309817..16313138, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (16203850..16207171, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Endoplasmic reticulum protein 44 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45485 Neighboring gene beta Hydroxy acid dehydrogenase 1 Neighboring gene Strumpellin and WASH-interacting protein Neighboring gene Cyclophilin 1 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. X-chromosome-wide profiling of MSL-1 distribution and dosage compensation in Drosophila. Legube G, et al. Genes Dev, 2006 Apr 1. PMID 16547175, Free PMC Article
  2. The genetic makeup of the Drosophila piRNA pathway. Handler D, et al. Mol Cell, 2013 Jun 6. PMID 23665231, Free PMC Article
  3. A genetic interaction map of cell cycle regulators. Billmann M, et al. Mol Biol Cell, 2016 Apr 15. PMID 26912791, Free PMC Article
  4. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970, Free PMC Article
  5. An Integrative Analysis of the InR/PI3K/Akt Network Identifies the Dynamic Response to Insulin Signaling. Vinayagam A, et al. Cell Rep, 2016 Sep 13. PMID 27626673, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG9915-PB
CG9915-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    16309817..16313138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001272675.1 → NP_001259604.1  uncharacterized protein Dmel_CG9915, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259604.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8JV07
    Conserved Domains (1) summary
    cl00146
    Location:568 → 775
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme

  2. NM_001103530.2 → NP_001097000.1  uncharacterized protein Dmel_CG9915, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097000.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8JV07
    Conserved Domains (1) summary
    cl00146
    Location:568 → 775
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8JV07 A8JV07

Gene LinkOut

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