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get3 guided entry of tail-anchored proteins factor 3, ATPase [ Danio rerio (zebrafish) ]

Gene ID: 325704, updated on 11-Apr-2024

Summary

Official Symbol
get3provided by ZNC
Official Full Name
guided entry of tail-anchored proteins factor 3, ATPaseprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040625-120
See related
Ensembl:ENSDARG00000018190 AllianceGenome:ZFIN:ZDB-GENE-040625-120
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
asna1; trc40; zgc:56540; zgc:86799; wu:fd05d03
Summary
Predicted to enable ATP hydrolysis activity. Involved in posttranslational protein targeting to endoplasmic reticulum membrane. Acts upstream of or within synapse assembly. Predicted to be located in endoplasmic reticulum. Predicted to be part of GET complex. Orthologous to human GET3 (guided entry of tail-anchored proteins factor 3, ATPase). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See get3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (52137528..52151943)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (51503403..51517818)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene RAD23 homolog A, nucleotide excision repair protein a Neighboring gene ring finger protein 11a Neighboring gene bestrophin 2 Neighboring gene RAB3D, member RAS oncogene family, a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC56540

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP hydrolysis activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity, acting on acid anhydrides IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of GET complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ATPase GET3
Names
arsA arsenite transporter, ATP-binding, homolog 1
NP_001002298.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002298.2NP_001002298.1  ATPase GET3

    See identical proteins and their annotated locations for NP_001002298.1

    Status: VALIDATED

    Source sequence(s)
    BC071461, BX901942, EH509131
    UniProtKB/Swiss-Prot
    B8A663, Q6IQE5
    Related
    ENSDARP00000018158.7, ENSDART00000007079.9
    Conserved Domains (1) summary
    pfam02374
    Location:31334
    ArsA_ATPase; Anion-transporting ATPase

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    52137528..52151943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)