serinc1 serine incorporator 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: serinc1provided by ZNC
Official Full Name: serine incorporator 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-4415
See related: Ensembl:ENSDARG00000009106 AllianceGenome:ZFIN:ZDB-GENE-030131-4415
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: tde2; zgc:77597; wu:fd02g01; wu:fd02g07
Summary: Predicted to act upstream of or within phosphatidylserine metabolic process and sphingolipid metabolic process. Predicted to be integral component of membrane. Predicted to be active in membrane. Is expressed in female organism and nervous system. Orthologous to human SERINC1 (serine incorporator 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	20	NC_007131.7 (40457609..40472519)
105	previous assembly	GRCz10 (GCF_000002035.5)	20	NC_007131.6 (40560499..40575409)

Chromosome 20 - NC_007131.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fd02g07.x1 (e-PCR)
- UniSTS:204048

fd02g01.x1 (e-PCR)
- UniSTS:194872

fj29c11.y1 (e-PCR)
- UniSTS:198980

fk97f08.x1 (e-PCR)
- UniSTS:201814

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: serine incorporator 1

Names: tumor differentially expressed 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.