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opm opossum [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32435, updated on 28-Oct-2024

Summary

Official Symbol
opmprovided by FlyBase
Official Full Name
opossumprovided by FlyBase
Primary source
FLYBASE:FBgn0264389
Locus tag
Dmel_CG9053
See related
AllianceGenome:FB:FBgn0264389
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG9053; Dmel\CG9053; Omp; opo; p24
Summary
Predicted to enable cargo receptor activity. Involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Located in Golgi cis cisterna; endoplasmic reticulum; and endoplasmic reticulum-Golgi intermediate compartment. Is expressed in adult head; nurse cell; and organism. Orthologous to human TMED1 (transmembrane p24 trafficking protein 1) and TMED5 (transmembrane p24 trafficking protein 5). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
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Genomic context

See opm in Genome Data Viewer
Location:
13A8-13A8; 1-49 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (15064836..15066432, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (14958869..14960465, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene highwire Neighboring gene ben Neighboring gene uncharacterized protein Neighboring gene NADH dehydrogenase (ubiquinone) B18 subunit Neighboring gene doppelganger von brummer Neighboring gene Lipid storage droplet-2

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables cargo receptor activity ISM
Inferred from Sequence Model
more info
PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in Golgi vesicle transport ISM
Inferred from Sequence Model
more info
PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in COPII-coated ER to Golgi transport vesicle IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in Golgi cis cisterna IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in endoplasmic reticulum-Golgi intermediate compartment IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum-Golgi intermediate compartment IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane ISM
Inferred from Sequence Model
more info
PubMed 

General protein information

Preferred Names
opossum
Names
CG9053-PA
CG9053-PC
opm-PA
opm-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    15064836..15066432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_167427.2NP_727821.2  opossum, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727821.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KV06, Q8T8Q0, Q9VXY9
    Conserved Domains (1) summary
    pfam01105
    Location:33227
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
  2. NM_132766.3NP_572994.1  opossum, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572994.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KV06, Q8T8Q0, Q9VXY9
    Related
    FBpp0073785
    Conserved Domains (1) summary
    pfam01105
    Location:33227
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD