cd82b CD82 molecule b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cd82bprovided by ZNC
Official Full Name: CD82 molecule bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-2857
See related: Ensembl:ENSDARG00000026070 AllianceGenome:ZFIN:ZDB-GENE-030131-2857
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cd82; kai1; wu:fc19g11
Summary: Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human CD82 (CD82 molecule). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 18

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	18	NC_007129.7 (27571466..27626391)
105	previous assembly	GRCz10 (GCF_000002035.5)	18	NC_007129.6 (27593226..27648151)

Chromosome 18 - NC_007129.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AI658185 (e-PCR)
- UniSTS:206086

fc19g05.x1 (e-PCR)
- UniSTS:192951

fc19g11.y1 (e-PCR)
- UniSTS:192954

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: CD82 molecule b

Names: CD82 antigen, b; kangai 1 (suppression of tumorigenicity 6, prostate)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_212663.1 → NP_997828.1 CD82 molecule b

See identical proteins and their annotated locations for NP_997828.1

Status: PROVISIONAL

Source sequence(s)

BC054586

UniProtKB/TrEMBL

B2GPR7, F6PBA5, Q7T2E0

Related

ENSDARP00000116394.1, ENSDART00000147886.2

Conserved Domains (2) summary

cd03160
Location:106 → 218

CD37_CD82_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...

pfam00335
Location:24 → 245

Tetraspannin; Tetraspanin family