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arcS archaeosine synthase subunit alpha [ Thermococcus kodakarensis KOD1 ]

Gene ID: 3235376, updated on 17-Feb-2024

Summary

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Gene symbol
arcS
Gene description
archaeosine synthase subunit alpha
Locus tag
TK_RS10835
Gene type
protein coding
Organism
Thermococcus kodakarensis KOD1 (strain: KOD1, type-material: type strain of Thermococcus kodakarensis)
Lineage
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus
Old locus tag
TK2156
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Genomic context

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Sequence:
NC_006624.1 (1933393..1935099, complement)

NC_006624.1Genomic Context describing neighboring genes Neighboring gene DUF2103 domain-containing protein Neighboring gene UPF0175 family protein Neighboring gene DUF3368 domain-containing protein Neighboring gene coiled-coil protein Neighboring gene carbamate kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006624.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a radical SAM enzyme involved in the synthesis of archaeosine. Yokogawa T, et al. Nat Chem Biol, 2019 Dec. PMID 31740832
  2. Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes. Fukui T, et al. Genome Res, 2005 Mar. PMID 15710748, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
archaeosine synthase subunit alpha
WP_011251106.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006624.1 Reference assembly

    Range
    1933393..1935099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011251106.1 archaeosine synthase subunit alpha [Thermococcus kodakarensis]

    See identical proteins and their annotated locations for WP_011251106.1

    UniProtKB/Swiss-Prot
    Q5JHG7
    Conserved Domains (1) summary
    COG1549
    Location:31 → 568
    COG1549; Archaeosine tRNA-guanine transglycosylase, contains uracil-DNA-glycosylase and PUA domains [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5JHG7.1

Gene LinkOut

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Molecular Biology Databases