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rbcL type III ribulose-bisphosphate carboxylase [ Thermococcus kodakarensis KOD1 ]

Gene ID: 3234791, updated on 17-Feb-2024

Summary

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Gene symbol
rbcL
Gene description
type III ribulose-bisphosphate carboxylase
Locus tag
TK_RS11535
Gene type
protein coding
Organism
Thermococcus kodakarensis KOD1 (strain: KOD1, type-material: type strain of Thermococcus kodakarensis)
Lineage
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus
Old locus tag
TK2290
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Genomic context

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Sequence:
NC_006624.1 (2073450..2074784)

NC_006624.1Genomic Context describing neighboring genes Neighboring gene metallophosphoesterase Neighboring gene archaeal histone HpkB Neighboring gene ArsR family transcriptional regulator Neighboring gene 30S ribosomal protein S17e

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006624.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Crystal structure of a novel-type archaeal rubisco with pentagonal symmetry. Kitano K, et al. Structure, 2001 Jun. PMID 11435112
  2. Ribulose bisphosphate carboxylase/oxygenase from the hyperthermophilic archaeon Pyrococcus kodakaraensis KOD1 is composed solely of large subunits and forms a pentagonal structure. Maeda N, et al. J Mol Biol, 1999 Oct 15. PMID 10512715
  3. Synthesis of catalytically active form III ribulose 1,5-bisphosphate carboxylase/oxygenase in archaea. Finn MW, et al. J Bacteriol, 2003 May. PMID 12730164, Free PMC Article
  4. Archaeal type III RuBisCOs function in a pathway for AMP metabolism. Sato T, et al. Science, 2007 Feb 16. PMID 17303759

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
type III ribulose-bisphosphate carboxylase
WP_011251240.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006624.1 Reference assembly

    Range
    2073450..2074784
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011251240.1 type III ribulose-bisphosphate carboxylase [Thermococcus kodakarensis]

    See identical proteins and their annotated locations for WP_011251240.1

    UniProtKB/Swiss-Prot
    O93627
    Conserved Domains (1) summary
    cd08213
    Location:23 → 438
    RuBisCO_large_III; Ribulose bisphosphate carboxylase large chain, Form III
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
1GEH_A.1
1GEH_B.1
1GEH_C.1
1GEH_D.1
1GEH_E.1
O93627.5

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