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CG4318 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32266, updated on 2-Nov-2024

Summary

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Official Symbol
CG4318provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0030455
Locus tag
Dmel_CG4318
See related
AllianceGenome:FB:FBgn0030455
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG4318
Summary
Predicted to enable DNA-binding transcription factor activity and transcription cis-regulatory region binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is expressed in germline cell. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See CG4318 in Genome Data Viewer
Location:
11E1-11E1; 1-42 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (13153461..13154924, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (13047494..13048957, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene small non-coding RNA 204 Neighboring gene uncharacterized protein Neighboring gene Major Facilitator Superfamily Transporter 10 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Brahma associated protein 60kD

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chigno/CG11180 and SUMO are Chinmo-interacting proteins with a role in Drosophila testes somatic support cells. Rinehart L, et al. PeerJ, 2024. PMID 38495765, Free PMC Article
  2. An RNA-interference screen in Drosophila to identify ZAD-containing C2H2 zinc finger genes that function in female germ cells. Shapiro-Kulnane L, et al. G3 (Bethesda), 2021 Jan 18. PMID 33561227, Free PMC Article
  3. ZAD-Domain Is Essential for Nuclear Localization of Insulator Proteins in Drosophila melanogaster. Zolotarev NA, et al. Acta Naturae, 2016 Jul-Sep. PMID 27795848, Free PMC Article
  4. Innovation of heterochromatin functions drives rapid evolution of essential ZAD-ZNF genes in Drosophila. Kasinathan B, et al. Elife, 2020 Nov 10. PMID 33169670, Free PMC Article
  5. A large-scale resource for tissue-specific CRISPR mutagenesis in Drosophila. Port F, et al. Elife, 2020 Feb 13. PMID 32053108, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables transcription cis-regulatory region binding ISS
Inferred from Sequence or Structural Similarity
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG4318-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    13153461..13154924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132632.2 → NP_572860.2  uncharacterized protein Dmel_CG4318 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572860.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V709, Q9VYG4
    Conserved Domains (4) summary
    COG5048
    Location:179 → 236
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:155 → 175
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam07776
    Location:5 → 64
    zf-AD; Zinc-finger associated domain (zf-AD)
    pfam13465
    Location:167 → 192
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VYG4 Q9VYG4

Gene LinkOut

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