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Fbxw16 F-box and WD-40 domain protein 16 [ Mus musculus (house mouse) ]

Gene ID: 320083, updated on 2-Nov-2024

Summary

Official Symbol
Fbxw16provided by MGI
Official Full Name
F-box and WD-40 domain protein 16provided by MGI
Primary source
MGI:MGI:2443324
See related
Ensembl:ENSMUSG00000074062 AllianceGenome:MGI:2443324
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
7420402K12Rik
Summary
Predicted to be active in cytoplasm. Is expressed in 2-cell stage embryo; 4-cell stage embryo; early conceptus; and oocyte. Orthologous to human FBXW12 (F-box and WD repeat domain containing 12). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
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Genomic context

See Fbxw16 in Genome Data Viewer
Location:
9 F2; 9 59.66 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (109261386..109278208, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (109432318..109449140, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_25232 Neighboring gene predicted gene, 24641 Neighboring gene F-box and WD-40 domain protein 22 Neighboring gene STARR-seq mESC enhancer starr_25233 Neighboring gene F-box and WD-40 domain protein 19 Neighboring gene STARR-seq mESC enhancer starr_25234 Neighboring gene F-box and WD-40 domain protein 23

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Clone Names

  • MGC117551

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
F-box and WD-40 domain protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177070.3NP_796044.2  F-box and WD-40 domain protein 16

    See identical proteins and their annotated locations for NP_796044.2

    Status: VALIDATED

    Source sequence(s)
    AU022303, BB580010, DV653569, DV662133
    Consensus CDS
    CCDS40773.1
    UniProtKB/TrEMBL
    Q497Z0
    Related
    ENSMUSP00000082051.7, ENSMUST00000084984.8
    Conserved Domains (1) summary
    pfam12937
    Location:548
    F-box-like; F-box-like

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    109261386..109278208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)