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CG31460 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 318747, updated on 10-May-2024

Summary

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Official Symbol
CG31460provided by FlyBase
Primary source
FLYBASE:FBgn0051460
Locus tag
Dmel_CG31460
See related
AllianceGenome:FB:FBgn0051460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:RE67710; CG11745; Dmel\CG31460
Summary
Predicted to be involved in protein N-linked glycosylation via arginine. Is expressed in adult heart. Orthologous to human KRTCAP2 (keratinocyte associated protein 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

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See CG31460 in Genome Data Viewer
Location:
85A3-85A3; 3-48 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (8562673..8563445)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (4388395..4389167)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR44291 Neighboring gene mitochondrial ribosomal protein S18A Neighboring gene pachytene checkpoint 2 Neighboring gene Centromeric protein-C Neighboring gene 5-hydroxytryptamine (serotonin) receptor 2B Neighboring gene long non-coding RNA:CR46124

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic interactions of separase regulatory subunits reveal the diverged Drosophila Cenp-C homolog. Heeger S, et al. Genes Dev, 2005 Sep 1. PMID 16140985, Free PMC Article
  2. The ribosomal protein genes and Minute loci of Drosophila melanogaster. Marygold SJ, et al. Genome Biol, 2007. PMID 17927810, Free PMC Article
  3. A Comprehensive Drosophila melanogaster Transcription Factor Interactome. Shokri L, et al. Cell Rep, 2019 Apr 16. PMID 30995488, Free PMC Article
  4. A large-scale, in vivo transcription factor screen defines bivalent chromatin as a key property of regulatory factors mediating Drosophila wing development. Schertel C, et al. Genome Res, 2015 Apr. PMID 25568052, Free PMC Article
  5. Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis. Lin WH, et al. Dis Model Mech, 2017 Feb 1. PMID 28067623, Free PMC Article

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in protein N-linked glycosylation via arginine IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG31460-PA
CG31460-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    8562673..8563445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001300307.1 → NP_001287236.1  uncharacterized protein Dmel_CG31460, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001287236.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8IGM0, Q8INQ7
    UniProtKB/TrEMBL
    A0A0B4LGZ4
    Conserved Domains (1) summary
    pfam09775
    Location:15 → 132
    Keratin_assoc; Keratinocyte-associated protein 2

  2. NM_169227.2 → NP_731253.1  uncharacterized protein Dmel_CG31460, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_731253.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8IGM0, Q8INQ7
    UniProtKB/TrEMBL
    A0A0B4LGZ4
    Related
    FBpp0081362
    Conserved Domains (1) summary
    pfam09775
    Location:15 → 132
    Keratin_assoc; Keratinocyte-associated protein 2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0B4LGZ4 A0A0B4LGZ4
Q8INQ7.1 Q8INQ7

Gene LinkOut

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