U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG12075 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31815, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
CG12075provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0030065
Locus tag
Dmel_CG12075
See related
AllianceGenome:FB:FBgn0030065
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG12075
Summary
Is expressed in several structures, including clypeo-labral primordium; dorsal epidermis primordium; embryonic anal pad; gland; and gut section. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CG12075 in Genome Data Viewer
Location:
8B3-8B4; 1-25 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (8838323..8872774)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (8732356..8766807)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene LIM homeobox 1 Neighboring gene long non-coding RNA:CR45537 Neighboring gene Moesin Neighboring gene Uroporphyrinogen III synthase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Natural genetic variation in Drosophila melanogaster reveals genes associated with Coxiella burnetii infection. Guzman RM, et al. Genetics, 2021 Mar 31. PMID 33789347, Free PMC Article
  2. Joint estimates of quantitative trait locus effect and frequency using synthetic recombinant populations of Drosophila melanogaster. Macdonald SJ, et al. Genetics, 2007 Jun. PMID 17435224, Free PMC Article
  3. TFOFinder: Python program for identifying purine-only double-stranded stretches in the predicted secondary structure(s) of RNA targets. Neugroschl A, et al. PLoS Comput Biol, 2023 Aug. PMID 37624852, Free PMC Article
  4. X-chromosome-wide profiling of MSL-1 distribution and dosage compensation in Drosophila. Legube G, et al. Genes Dev, 2006 Apr 1. PMID 16547175, Free PMC Article
  5. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Menoret D, et al. Genome Biol, 2013 Aug 23. PMID 23972280, Free PMC Article

See all (33) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
Names
CG12075-PA
CG12075-PB
CG12075-PC
CG12075-PD
CG12075-PE

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    8838323..8872774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001258653.1 → NP_001245582.1  uncharacterized protein Dmel_CG12075, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245582.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K0Y2, Q8T070, Q9W3B8
    Conserved Domains (1) summary
    cd00934
    Location:12 → 120
    PTB; Phosphotyrosine-binding (PTB) PH-like fold

  2. NM_001272431.1 → NP_001259360.1  uncharacterized protein Dmel_CG12075, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259360.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K0Y2, Q8T070, Q9W3B8
    Conserved Domains (1) summary
    cd00934
    Location:12 → 120
    PTB; Phosphotyrosine-binding (PTB) PH-like fold

  3. NM_206663.3 → NP_996386.1  uncharacterized protein Dmel_CG12075, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_996386.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K0Y2, Q8T070, Q9W3B8
    Conserved Domains (1) summary
    cd00934
    Location:12 → 120
    PTB; Phosphotyrosine-binding (PTB) PH-like fold

  4. NM_001272430.1 → NP_001259359.1  uncharacterized protein Dmel_CG12075, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259359.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M9PE29, Q7K0Y2
    Conserved Domains (1) summary
    cd00934
    Location:12 → 120
    PTB; Phosphotyrosine-binding (PTB) PH-like fold

  5. NM_132278.4 → NP_572506.2  uncharacterized protein Dmel_CG12075, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572506.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7K0Y2, Q8T070, Q9W3B8
    Related
    FBpp0071196
    Conserved Domains (1) summary
    cd00934
    Location:12 → 120
    PTB; Phosphotyrosine-binding (PTB) PH-like fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
M9PE29 M9PE29
Q7K0Y2 Q7K0Y2
Q9W3B8 Q9W3B8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools