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Pim2 Pim-2 proto-oncogene, serine/threonine kinase [ Rattus norvegicus (Norway rat) ]

Gene ID: 317366, updated on 10-Jul-2024

Summary

Gene symbol
Pim2
Gene description
Pim-2 proto-oncogene, serine/threonine kinase
See related
EnsemblRapid:ENSRNOG00000008177
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Brain (RPKM 55.6), Spleen (RPKM 35.3) and 8 other tissues See more
Orthologs
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Genomic context

See Pim2 in Genome Data Viewer
Location:
Xq12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (17289509..17294778, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (14617582..14622851, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (15462621..15467890, complement)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene polyglutamine binding protein 1 Neighboring gene solute carrier family 35 member A2 Neighboring gene OTU deubiquitinase 5 Neighboring gene solute carrier family 25 member 39, pseudogene 6 Neighboring gene potassium voltage-gated channel subfamily D member 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General protein information

Preferred Names
serine/threonine-protein kinase pim-2
Names
pim-2 oncogene
NP_001165574.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001172103.1NP_001165574.1  serine/threonine-protein kinase pim-2

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000021
    UniProtKB/TrEMBL
    A6KP72, F1M419
    Related
    ENSRNOP00000011207.6, ENSRNOT00000011207.9
    Conserved Domains (2) summary
    smart00220
    Location:32286
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:31287
    PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    17289509..17294778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)