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CG6067 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31529, updated on 28-Oct-2024

Summary

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Official Symbol
CG6067provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0029828
Locus tag
Dmel_CG6067
See related
AllianceGenome:FB:FBgn0029828
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG6067; SPH254
Summary
Predicted to be involved in innate immune response. Predicted to be active in extracellular space. Is expressed in adult head. [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
all
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Genomic context

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See CG6067 in Genome Data Viewer
Location:
5D1-5D1; 1-15 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (5955629..5958283)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (5849662..5852316)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene female sterile (1) M3 Neighboring gene Glutamate receptor interacting protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Toll and Imd pathways are the major regulators of the immune response in Drosophila. De Gregorio E, et al. EMBO J, 2002 Jun 3. PMID 12032070, Free PMC Article
  2. Reproductive status alters transcriptomic response to infection in female Drosophila melanogaster. Short SM, et al. G3 (Bethesda), 2013 May 20. PMID 23550122, Free PMC Article
  3. Building a platform for predicting functions of serine protease-related proteins in Drosophila melanogaster and other insects. Cao X, et al. Insect Biochem Mol Biol, 2018 Dec. PMID 30367934, Free PMC Article
  4. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
  5. Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster. Juneja P, et al. BMC Genomics, 2016 Nov 28. PMID 27894253, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
NOT enables peptidase activity IKR
Inferred from Key Residues
more info
  
NOT enables serine-type endopeptidase activity IKR
Inferred from Key Residues
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG6067-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    5955629..5958283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132055.2 → NP_572283.1  uncharacterized protein Dmel_CG6067 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572283.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D3DMH6, Q9W452
    Related
    FBpp0070829
    Conserved Domains (1) summary
    cl21584
    Location:62 → 174
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8MT25 Q8MT25
Q9W452 Q9W452

Gene LinkOut

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