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rbcL RuBisCO large subunit [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 3131463, updated on 12-Jul-2024

Summary

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Gene symbol
rbcL
Gene description
RuBisCO large subunit
Locus tag
OrsajCp033
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Oryza sativa Japonica Group (cultivar: Nipponbare)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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See rbcL in Genome Data Viewer
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) Plastid (non-nuclear) NC_001320.1 (54095..55528)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) Plastid (non-nuclear) NC_001320.1 (54095..55528)

NC_001320.1Genomic Context describing neighboring genes Neighboring gene tRNA-Met Neighboring gene ATP synthase epsilon chain Neighboring gene ATPase beta chain Neighboring gene similar to rpl23 Neighboring gene ORF133

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Availability of Rubisco small subunit up-regulates the transcript levels of large subunit for stoichiometric assembly of its holoenzyme in rice. Suzuki Y, et al. Plant Physiol, 2012 Sep. PMID 22811433, Free PMC Article
  2. Overexpression of both Rubisco and Rubisco activase rescues rice photosynthesis and biomass under heat stress. Qu Y, et al. Plant Cell Environ, 2021 Jul. PMID 33745135
  3. Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice. Lu Y, et al. Physiol Plant, 2014 Mar. PMID 24102419
  4. The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals. Hiratsuka J, et al. Mol Gen Genet, 1989 Jun. PMID 2770692
  5. A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae). Morton BR, et al. Curr Genet, 1993 Oct. PMID 8252646

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Overexpression of both Rubisco and Rubisco activase rescues rice photosynthesis and biomass under heat stress.
    Title: Overexpression of both Rubisco and Rubisco activase rescues rice photosynthesis and biomass under heat stress.
  2. Data suggest that an alternative pathway to produce glyoxylate, and that the accumulated glyoxylate inhibits photosynthesis by deactivating Rubisco (large and small subunits) in the glycolate oxidase (GLO, NM_001065444))-suppressed plants.
    Title: Suppression of glycolate oxidase causes glyoxylate accumulation that inhibits photosynthesis through deactivating Rubisco in rice.
  3. The availability of RBCS protein up-regulates the gene expression of rbcL primarily at the transcript level in a quantitative manner for stoichiometric assembly of Rubisco holoenzyme.
    Title: Availability of Rubisco small subunit up-regulates the transcript levels of large subunit for stoichiometric assembly of its holoenzyme in rice.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
RuBisCO large subunit
Names
ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001320.1 Reference assembly

    Range
    54095..55528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_039391.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Oryza sativa Japonica Group]

    See identical proteins and their annotated locations for NP_039391.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0C510, P0C511, P0C512, P12089, Q6QY04, Q6QY68
    UniProtKB/TrEMBL
    A0A0K0LL33, A0A0K0LQW8, A0A0N7EIT9, A0A0N9E107, A0A7S7YAB3, J7F213, Q5K3B1
    Conserved Domains (1) summary
    CHL00040
    Location:1 → 475
    rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C512.1

Gene LinkOut

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