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mRpL16 mitochondrial ribosomal protein L16 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31150, updated on 18-Sep-2024

Summary

Official Symbol
mRpL16provided by FlyBase
Official Full Name
mitochondrial ribosomal protein L16provided by FlyBase
Primary source
FLYBASE:FBgn0023519
Locus tag
Dmel_CG3109
See related
AllianceGenome:FB:FBgn0023519
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-2Bd; CG3109; D-15; D15; Dmel\CG3109; EG:63B12.2; L16
Summary
Predicted to enable rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be part of mitochondrial large ribosomal subunit. Is expressed in several structures, including adult head; embryonic/larval midgut; embryonic/larval muscle system; and spermatozoon. Orthologous to human MRPL16 (mitochondrial ribosomal protein L16). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See mRpL16 in Genome Data Viewer
Location:
2B14-2B14; 1-0.2 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (1890256..1891482)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (1784289..1785515)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Cytochrome c oxidase assembly factor 8 Neighboring gene trithorax-related Neighboring gene armadillo Neighboring gene antisense RNA:CR45929 Neighboring gene antisense RNA:CR43864 Neighboring gene Lipid droplet assembly factor 1 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables rRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome ISS
Inferred from Sequence or Structural Similarity
more info
 
enables structural constituent of ribosome TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitochondrial translation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in mitochondrial translation TAS
Traceable Author Statement
more info
PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of mitochondrial large ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of mitochondrial large ribosomal subunit TAS
Traceable Author Statement
more info
PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
mitochondrial ribosomal protein L16
Names
CG3109-PA
CG3109-PB
mRpL16-PA
mRpL16-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    1890256..1891482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001272219.1NP_001259148.1  mitochondrial ribosomal protein L16, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259148.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O46082, Q9W547
    Conserved Domains (1) summary
    pfam00252
    Location:64184
    Ribosomal_L16; Ribosomal protein L16p/L10e
  2. NM_080302.3NP_525041.1  mitochondrial ribosomal protein L16, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_525041.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O46082, Q9W547
    Related
    FBpp0070301
    Conserved Domains (1) summary
    pfam00252
    Location:64184
    Ribosomal_L16; Ribosomal protein L16p/L10e