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sta stubarista [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31106, updated on 2-Nov-2024

Summary

Official Symbol
staprovided by FlyBase
Official Full Name
stubaristaprovided by FlyBase
Primary source
FLYBASE:FBgn0003517
Locus tag
Dmel_CG14792
See related
AllianceGenome:FB:FBgn0003517
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
37LRP/p40; anon-EST:Liang-2.56; CG14792; chrX:1339078..1339216; clone 2.56; Dmel\CG14792; EG:80H7.6; k14; l(1)2Af; l(1)G0130; l(1)G0448; Lam-r; P40; Rp 40; Rp40; RpSA; S2; Sa; Sta; STA
Summary
Enables ribosome binding activity. A structural constituent of ribosome. Predicted to be involved in cytoplasmic translation and ribosomal small subunit assembly. Located in cytosolic ribosome. Is expressed in adult head; adult heart; embryonic/larval midgut; and spermatozoon. Orthologous to human RPSA (ribosomal protein SA). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See sta in Genome Data Viewer
Location:
2B1-2B1; 1-0.2 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (1481797..1483413, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (1375830..1377446, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Rab27 Neighboring gene ncRNA Neighboring gene meiotic 38 Neighboring gene rush hour Neighboring gene ncRNA Neighboring gene NMDA receptor 2 Neighboring gene insomniac Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in cytoplasmic translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cytoplasmic translation IC
Inferred by Curator
more info
PubMed 
involved_in cytoplasmic translation TAS
Traceable Author Statement
more info
PubMed 
involved_in ribosomal small subunit assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytosolic ribosome HDA PubMed 
located_in cytosolic ribosome IDA
Inferred from Direct Assay
more info
PubMed 
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of cytosolic small ribosomal subunit TAS
Traceable Author Statement
more info
PubMed 
located_in ribosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
stubarista
Names
CG14792-PA
CG14792-PB
CG14792-PE
CG14792-PF
Laminin-receptor
laminin receptor
ribosomal protein SA
sta-PA
sta-PB
sta-PE
sta-PF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    1481797..1483413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_166889.2NP_726744.1  stubarista, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726744.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P38979, Q058X4, Q7KW10, Q9W583, X2JC80
    UniProtKB/TrEMBL
    C6SV50
    Related
    FBpp0070278
    Conserved Domains (1) summary
    PTZ00254
    Location:1247
    PTZ00254; 40S ribosomal protein SA; Provisional
  2. NM_001297856.1NP_001284785.1  stubarista, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001284785.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P38979, Q058X4, Q7KW10, Q9W583, X2JC80
    UniProtKB/TrEMBL
    C6SV50
    Conserved Domains (1) summary
    PTZ00254
    Location:1247
    PTZ00254; 40S ribosomal protein SA; Provisional
  3. NM_057402.5NP_476750.1  stubarista, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_476750.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P38979, Q058X4, Q7KW10, Q9W583, X2JC80
    UniProtKB/TrEMBL
    C6SV50
    Related
    FBpp0070277
    Conserved Domains (1) summary
    PTZ00254
    Location:1247
    PTZ00254; 40S ribosomal protein SA; Provisional
  4. NM_166890.3NP_726745.3  stubarista, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726745.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P38979, Q058X4, Q7KW10, Q9W583, X2JC80
    UniProtKB/TrEMBL
    C6SV50
    Conserved Domains (1) summary
    PTZ00254
    Location:1247
    PTZ00254; 40S ribosomal protein SA; Provisional