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ASPACDRAFT_77326 uncharacterized protein [ Aspergillus aculeatus ATCC 16872 ]

Gene ID: 30978754, updated on 31-Oct-2024

Summary

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Gene symbol
ASPACDRAFT_77326
Gene description
uncharacterized protein
Locus tag
ASPACDRAFT_77326
See related
FungiDB:ASPACDRAFT_77326; VEuPathDB:ASPACDRAFT_77326
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Aspergillus aculeatus ATCC 16872 (strain: ATCC 16872, culture-collection: ATCC:16872, type-material: culture from type material of Aspergillus aculeatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See ASPACDRAFT_77326 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_017962980.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017962980.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type catalytic step 1 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_017962980.1 Reference assembly

    Range
    1401153..1402816
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020204940.1 → XP_020057947.1  uncharacterized protein ASPACDRAFT_77326 [Aspergillus aculeatus ATCC 16872]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1L9X0E5
    Conserved Domains (4) summary
    sd00039
    Location:202 → 236
    7WD40; WD40 repeat [structural motif]
    pfam08606
    Location:67 → 131
    Prp19; Prp19/Pso4-like
    cd16656
    Location:2 → 54
    RING-Ubox_PRP19; U-box domain, a modified RING finger, found in pre-mRNA-processing factor 19 (Prp19) and similar proteins
    cl25539
    Location:207 → 419
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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