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CG3038 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 30970, updated on 10-May-2024

Summary

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Official Symbol
CG3038provided by FlyBase
Primary source
FLYBASE:FBgn0040373
Locus tag
Dmel_CG3038
See related
AllianceGenome:FB:FBgn0040373
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
dbeta3GnT; Dmel\CG3038; EG:BACR37P7.1; GalT3
Summary
Predicted to enable glycosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be active in Golgi membrane. Is expressed in organism. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See CG3038 in Genome Data Viewer
Location:
1A1-1A1; 1-0 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (243954..245856, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (137987..139889, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43863 Neighboring gene uncharacterized protein Neighboring gene trynity Neighboring gene G9a Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Drosophila G9a is a nonessential gene. Seum C, et al. Genetics, 2007 Nov. PMID 18039887, Free PMC Article
  2. The Drosophila gene brainiac encodes a glycosyltransferase putatively involved in glycosphingolipid synthesis. Schwientek T, et al. J Biol Chem, 2002 Sep 6. PMID 12130651
  3. Recombination, dominance and selection on amino acid polymorphism in the Drosophila genome: contrasting patterns on the X and fourth chromosomes. Sheldahl LA, et al. Genetics, 2003 Nov. PMID 14668375, Free PMC Article
  4. An analysis of genetic changes during the divergence of Drosophila species. Sousa-Neves R, et al. PLoS One, 2010 May 5. PMID 20463966, Free PMC Article
  5. Identification of transcriptional responsive genes to acetic acid, ethanol, and 2-phenylethanol exposure in Drosophila melanogaster. Seong KM, et al. Pestic Biochem Physiol, 2020 May. PMID 32359537

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables glycosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in Golgi membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG3038-PA
CG3038-PB
CG3038-PC
NP_001284732.1
NP_569833.1
NP_726658.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    243954..245856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001297803.1 → NP_001284732.1  uncharacterized protein Dmel_CG3038, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001284732.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9V394, X2JD78
    Conserved Domains (1) summary
    cl21608
    Location:103 → 268
    Galactosyl_T; Galactosyltransferase

  2. NM_166834.2 → NP_726658.1  uncharacterized protein Dmel_CG3038, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726658.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IRZ0, Q9V394
    Related
    FBpp0070102
    Conserved Domains (1) summary
    cl21608
    Location:73 → 267
    Galactosyl_T; Galactosyltransferase

  3. NM_130477.4 → NP_569833.1  uncharacterized protein Dmel_CG3038, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_569833.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95RP8, Q9V394
    Related
    FBpp0070103
    Conserved Domains (1) summary
    cl21608
    Location:103 → 297
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6W4I1 Q6W4I1
Q6W4J1 Q6W4J1
Q6W4K1 Q6W4K1
Q8IRZ0 Q8IRZ0
Q95RP8 Q95RP8
Q9V394 Q9V394
X2JD78 X2JD78

Gene LinkOut

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