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Adam10 ADAM metallopeptidase domain 10 [ Rattus norvegicus (Norway rat) ]

Gene ID: 29650, updated on 2-Nov-2024

Summary

Symbol
Adam10provided by RGD
Full Name
ADAM metallopeptidase domain 10provided by RGD
Primary source
RGD:2032
See related
EnsemblRapid:ENSRNOG00000054257 AllianceGenome:RGD:2032
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
MADM
Summary
Enables metalloendopeptidase activity. Involved in several processes, including amyloid-beta formation; regulation of dendritic spine morphogenesis; and response to antineoplastic agent. Located in several cellular components, including postsynaptic membrane; synaptic vesicle; and trans-Golgi network. Is active in glutamatergic synapse and postsynapse. Biomarker of several diseases, including Alzheimer's disease; cataract; status epilepticus; thoracic aortic aneurysm; and traumatic brain injury. Human ortholog(s) of this gene implicated in Alzheimer's disease 18 and reticulate acropigmentation of Kitamura. Orthologous to human ADAM10 (ADAM metallopeptidase domain 10). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in Spleen (RPKM 367.5), Thymus (RPKM 291.3) and 9 other tissues See more
Orthologs
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Genomic context

See Adam10 in Genome Data Viewer
Location:
8q24
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (80226862..80358728)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (71346008..71477889)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (77107355..77237483)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene SAFB-like, transcription modulator Neighboring gene uncharacterized LOC102551907 Neighboring gene MINDY lysine 48 deubiquitinase 2 Neighboring gene uncharacterized LOC120094202 Neighboring gene uncharacterized LOC134480203 Neighboring gene lipase C, hepatic type

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 
enables endopeptidase activity ISO
Inferred from Sequence Orthology
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metallodipeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables metallodipeptidase activity ISO
Inferred from Sequence Orthology
more info
 
enables metalloendopeptidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables metalloendopeptidase activity ISO
Inferred from Sequence Orthology
more info
 
enables metalloendopeptidase activity involved in amyloid precursor protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metalloendopeptidase activity involved in amyloid precursor protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
enables metalloendopeptidase activity involved in amyloid precursor protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
enables metallopeptidase activity ISO
Inferred from Sequence Orthology
more info
 
enables metallopeptidase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables protein homodimerization activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables protein kinase binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in Notch signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in Notch signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in Notch signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 
involved_in adherens junction organization ISO
Inferred from Sequence Orthology
more info
 
involved_in amyloid precursor protein catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in amyloid precursor protein catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in amyloid-beta formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cochlea development IEA
Inferred from Electronic Annotation
more info
 
involved_in cochlea development ISO
Inferred from Sequence Orthology
more info
 
involved_in constitutive protein ectodomain proteolysis IEA
Inferred from Electronic Annotation
more info
 
involved_in constitutive protein ectodomain proteolysis ISO
Inferred from Sequence Orthology
more info
 
involved_in epidermal growth factor receptor ligand maturation IEA
Inferred from Electronic Annotation
more info
 
involved_in epidermal growth factor receptor ligand maturation ISO
Inferred from Sequence Orthology
more info
 
involved_in in utero embryonic development IEA
Inferred from Electronic Annotation
more info
 
involved_in in utero embryonic development ISO
Inferred from Sequence Orthology
more info
 
involved_in in utero embryonic development ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in membrane protein ectodomain proteolysis IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within membrane protein ectodomain proteolysis ISO
Inferred from Sequence Orthology
more info
 
involved_in membrane protein ectodomain proteolysis ISO
Inferred from Sequence Orthology
more info
 
involved_in membrane protein ectodomain proteolysis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in monocyte activation IEA
Inferred from Electronic Annotation
more info
 
involved_in monocyte activation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of cell adhesion ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cell adhesion ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in pore complex assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in pore complex assembly ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of T cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of T cell chemotaxis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of cell growth IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell growth ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell migration ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in postsynapse organization IEA
Inferred from Electronic Annotation
more info
 
involved_in postsynapse organization ISO
Inferred from Sequence Orthology
more info
 
involved_in protein catabolic process at postsynapse IEA
Inferred from Electronic Annotation
more info
 
involved_in protein catabolic process at postsynapse ISO
Inferred from Sequence Orthology
more info
 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in protein phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within protein processing ISO
Inferred from Sequence Orthology
more info
 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of Notch signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of cellular component organization IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of dendritic spine morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of neurotransmitter receptor localization to postsynaptic specialization membrane IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of neurotransmitter receptor localization to postsynaptic specialization membrane ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of osteoclast differentiation NAS
Non-traceable Author Statement
more info
PubMed 
involved_in regulation of postsynapse organization IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of postsynapse organization ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of vasculature development IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of vasculature development ISO
Inferred from Sequence Orthology
more info
 
involved_in response to antineoplastic agent IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in response to tumor necrosis factor IEA
Inferred from Electronic Annotation
more info
 
involved_in response to tumor necrosis factor ISO
Inferred from Sequence Orthology
more info
 
involved_in signaling receptor ligand precursor processing ISO
Inferred from Sequence Orthology
more info
 
involved_in spermatogenesis IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in Golgi apparatus ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi-associated vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi-associated vesicle ISO
Inferred from Sequence Orthology
more info
 
located_in Golgi-associated vesicle ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 
located_in axon IEA
Inferred from Electronic Annotation
more info
 
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in cell surface ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in clathrin-coated vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in dendrite IDA
Inferred from Direct Assay
more info
PubMed 
located_in dendritic spine IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in glutamatergic synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 
is_active_in glutamatergic synapse ISO
Inferred from Sequence Orthology
more info
 
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in perinuclear endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in perinuclear endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
part_of pore complex IEA
Inferred from Electronic Annotation
more info
 
part_of pore complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in postsynapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in postsynapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 
located_in postsynaptic density ISO
Inferred from Sequence Orthology
more info
 
located_in postsynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in synaptic membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in synaptic membrane IEA
Inferred from Electronic Annotation
more info
 
located_in synaptic membrane ISO
Inferred from Sequence Orthology
more info
 
located_in synaptic vesicle IDA
Inferred from Direct Assay
more info
PubMed 
located_in tetraspanin-enriched microdomain IEA
Inferred from Electronic Annotation
more info
 
located_in tetraspanin-enriched microdomain ISO
Inferred from Sequence Orthology
more info
 
located_in trans-Golgi network IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
disintegrin and metalloproteinase domain-containing protein 10
Names
ADAM 10
RGD1566370
a disintegrin and metallopeptidase domain 10
a disintegrin and metalloprotease domain 10
kuzbanian protein homolog
mammalian disintegrin-metalloprotease
NP_062127.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019254.1NP_062127.1  disintegrin and metalloproteinase domain-containing protein 10 precursor

    See identical proteins and their annotated locations for NP_062127.1

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000008
    UniProtKB/Swiss-Prot
    A0A0G2K562, Q10743
    UniProtKB/TrEMBL
    A0A8I5ZQN5
    Related
    ENSRNOP00000109148.1, ENSRNOT00000159997.1
    Conserved Domains (3) summary
    smart00050
    Location:467546
    DISIN; Homologues of snake disintegrins
    cd04270
    Location:221460
    ZnMc_TACE_like; Zinc-dependent metalloprotease; TACE_like subfamily. TACE, the tumor-necrosis factor-alpha converting enzyme, releases soluble TNF-alpha from transmembrane pro-TNF-alpha.
    pfam01562
    Location:48141
    Pep_M12B_propep; Reprolysin family propeptide

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    80226862..80358728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)