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PGN_RS07945 putative peptidoglycan-binding domain-containing protein [ Porphyromonas gingivalis ATCC 33277 ]

Gene ID: 29256837, updated on 24-Dec-2023

Summary

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Gene symbol
PGN_RS07945
Gene description
putative peptidoglycan-binding domain-containing protein
Locus tag
PGN_RS07945
Gene type
protein coding
Organism
Porphyromonas gingivalis ATCC 33277 (strain: ATCC 33277, type-material: type strain of Bacteroides gingivalis)
Lineage
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas
Old locus tag
PGN_1670
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Genomic context

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Sequence:
NC_010729.1 (1865870..1866448)

NC_010729.1Genomic Context describing neighboring genes Neighboring gene IS5 family transposase Neighboring gene DUF1661 domain-containing protein Neighboring gene chromate transporter Neighboring gene chromate transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010729.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. COG3926 and COG5526: a tale of two new lysozyme-like protein families. Pei J, et al. Protein Sci, 2005 Oct. PMID 16155206, Free PMC Article
  2. Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis. Naito M, et al. DNA Res, 2008 Aug. PMID 18524787, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative peptidoglycan-binding domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010729.1 Reference assembly

    Range
    1865870..1866448
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005874170.1 putative peptidoglycan-binding domain-containing protein [Porphyromonas gingivalis]

    See identical proteins and their annotated locations for WP_005874170.1

    UniProtKB/TrEMBL
    A0A2D2P334, B2RLE4, Q7MXB3
    Conserved Domains (2) summary
    pfam09374
    Location:101 → 187
    PG_binding_3; Predicted Peptidoglycan domain
    cd13926
    Location:2 → 99
    N-acetylmuramidase_GH108; N-acetylmuramidase domain of the glycosyl hydrolase 108 family
Nucleotide Protein
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