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pth aminoacyl-tRNA hydrolase [ Porphyromonas gingivalis ATCC 33277 ]

Gene ID: 29255526, updated on 24-Dec-2023

Summary

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Gene symbol
pth
Gene description
aminoacyl-tRNA hydrolase
Locus tag
PGN_RS01340
Gene type
protein coding
Organism
Porphyromonas gingivalis ATCC 33277 (strain: ATCC 33277, type-material: type strain of Bacteroides gingivalis)
Lineage
Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas
Old locus tag
PGN_0278
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Genomic context

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Sequence:
NC_010729.1 (297751..298308, complement)

NC_010729.1Genomic Context describing neighboring genes Neighboring gene diphosphate--fructose-6-phosphate 1-phosphotransferase Neighboring gene DUF1905 domain-containing protein Neighboring gene RNA-binding S4 domain-containing protein Neighboring gene 50S ribosomal protein L25/general stress protein Ctc Neighboring gene methionine--tRNA ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010729.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis. Naito M, et al. DNA Res, 2008 Aug. PMID 18524787, Free PMC Article
  2. Crystal structure of Staphylococcus aureus peptidyl-tRNA hydrolase at a 2.25 Å resolution. Zhang F, et al. Acta Biochim Biophys Sin (Shanghai), 2015 Dec. PMID 26508479
  3. Structural basis for the substrate recognition and catalysis of peptidyl-tRNA hydrolase. Ito K, et al. Nucleic Acids Res, 2012 Nov 1. PMID 22923517, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
aminoacyl-tRNA hydrolase
WP_012457388.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010729.1 Reference assembly

    Range
    297751..298308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012457388.1 aminoacyl-tRNA hydrolase [Porphyromonas gingivalis]

    See identical proteins and their annotated locations for WP_012457388.1

    UniProtKB/Swiss-Prot
    B2RHF2
    Conserved Domains (1) summary
    PRK05426
    Location:1 → 185
    PRK05426; peptidyl-tRNA hydrolase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B2RHF2.1

Gene LinkOut

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