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CC77DRAFT_363775 hypothetical protein [ Alternaria alternata ]

Gene ID: 29116974, updated on 17-May-2024

Summary

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Gene symbol
CC77DRAFT_363775
Gene description
hypothetical protein
Locus tag
CC77DRAFT_363775
See related
FungiDB:CC77DRAFT_363775; VEuPathDB:CC77DRAFT_363775
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Alternaria alternata (strain: SRC1lrK2f)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Alternaria; Alternaria alternata group
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Genomic context

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Location:
chromosome: Unknown
Exon count:
4

NW_017306209.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2-16 kDa Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene MFS general substrate transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017306209.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_017306209.1 Reference assembly

    Range
    517677..521254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018531380.1 → XP_018382354.1  hypothetical protein CC77DRAFT_363775 [Alternaria alternata]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A177DB13, A0A4Q4NIL4
    Conserved Domains (1) summary
    PRK14501
    Location:230 → 928
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Nucleotide Protein
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