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CC77DRAFT_1062346 hypothetical protein [ Alternaria alternata ]

Gene ID: 29114105, updated on 26-Jun-2024

Summary

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Gene symbol
CC77DRAFT_1062346
Gene description
hypothetical protein
Locus tag
CC77DRAFT_1062346
See related
FungiDB:CC77DRAFT_1062346; VEuPathDB:CC77DRAFT_1062346
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Alternaria alternata (strain: SRC1lrK2f)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Alternaria; Alternaria alternata group
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Genomic context

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Location:
chromosome: Unknown
Exon count:
3

NW_017306202.1Genomic Context describing neighboring genes Neighboring gene ADP-ribose pyrophosphatase Neighboring gene cytoskeletal adaptor protein saga Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene MFS general substrate transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017306202.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_017306202.1 Reference assembly

    Range
    56446..62079
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018528511.1 → XP_018384599.1  hypothetical protein CC77DRAFT_1062346 [Alternaria alternata]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A177DID8
    Conserved Domains (4) summary
    cd14879
    Location:19 → 765
    MYSc_Myo17; class XVII myosin, motor domain
    pfam00173
    Location:945 → 1002
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
    pfam03142
    Location:1201 → 1709
    Chitin_synth_2; Chitin synthase
    pfam08766
    Location:1785 → 1838
    DEK_C; DEK C terminal domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases