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Serpinb6e serine (or cysteine) peptidase inhibitor, clade B, member 6e [ Rattus norvegicus (Norway rat) ]

Gene ID: 291087, updated on 2-Nov-2024

Summary

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Official Symbol
Serpinb6eprovided by RGD
Official Full Name
serine (or cysteine) peptidase inhibitor, clade B, member 6eprovided by RGD
Primary source
RGD:1561697
See related
EnsemblRapid:ENSRNOG00000070025 AllianceGenome:RGD:1561697
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1561697
Summary
Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Serpinb6e in Genome Data Viewer
Location:
17p12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (31386753..31396024)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (31177985..31187261)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (32412737..32422011)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene serpin family B member 6A Neighboring gene uncharacterized LOC102554685 Neighboring gene serine (or cysteine) peptidase inhibitor, clade B, member 6e like 1 Neighboring gene serine (or cysteine) peptidase inhibitor, clade B, member 9d Neighboring gene serine (or cysteine) peptidase inhibitor, clade B, member 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
serine (or cysteine) peptidase inhibitor, clade B, member 6e; serpin B6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    31386753..31396024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006253875.2 → XP_006253937.2  serpin B6

    UniProtKB/TrEMBL
    A0A8I6A713
    Related
    ENSRNOP00000088003.1, ENSRNOT00000098149.2
    Conserved Domains (1) summary
    cl38926
    Location:1 → 378
    serpin; SERine Proteinase INhibitors (serpin) family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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