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psbD photosystem II protein D2 [ Ipomoea nil (Japanese morning glory) ]

Gene ID: 29082209, updated on 31-May-2023

Summary

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Gene symbol
psbD
Gene description
photosystem II protein D2
Locus tag
IPN_cp071
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ipomoea nil (cultivar: Tokyo-kokei standard)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Genomic context

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See psbD in Genome Data Viewer
Annotation release Status Assembly Chr Location
100 current Asagao_1.1 (GCF_001879475.1) Chloroplast (non-nuclear) NC_031159.1 (34416..35477)

NC_031159.1Genomic Context describing neighboring genes Neighboring gene tRNA-Glu Neighboring gene tRNA-Thr Neighboring gene photosystem II CP43 chlorophyll apoprotein Neighboring gene tRNA-Ser Neighboring gene photosystem II protein Z

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_031159.1 Chromosome Chloroplast Reference Asagao_1.1 non-nuclear

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence and analysis of the Japanese morning glory Ipomoea nil. Hoshino A, et al. Nat Commun, 2016 Nov 8. PMID 27824041, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
photosystem II protein D2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_031159.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009295099.1 photosystem II protein D2 (chloroplast) [Ipomoea nil]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    U3R2M1
    Conserved Domains (1) summary
    PLN00074
    Location:1 → 353
    PLN00074; photosystem II D2 protein (PsbD); Provisional
Nucleotide Protein
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