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DEHA2C02486g DEHA2C02486p [ Debaryomyces hansenii CBS767 ]

Gene ID: 2900353, updated on 17-May-2024

Summary

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Gene symbol
DEHA2C02486g
Gene description
DEHA2C02486p
Locus tag
DEHA2C02486g
See related
FungiDB:DEHA2C02486g; VEuPathDB:DEHA2C02486g
Gene type
protein coding
RNA name
DEHA2C02486p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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See DEHA2C02486g in Genome Data Viewer
Location:
chromosome: C
Exon count:
1
Sequence:
Chromosome: C; NC_006045.2 (224769..226337)

Chromosome C - NC_006045.2Genomic Context describing neighboring genes Neighboring gene tRNA-Arg Neighboring gene DEHA2C02464p Neighboring gene DEHA2C02508p Neighboring gene DEHA2C02530p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006045.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2C02486p
XP_457788.1
  • similar to uniprot|P13045 Saccharomyces cerevisiae YDR009W GAL3 Transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006045.2 Reference assembly

    Range
    224769..226337
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_457788.1 → XP_457788.1  DEHA2C02486p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_457788.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6BVI1
    Conserved Domains (4) summary
    COG0153
    Location:26 → 516
    GalK; Galactokinase [Carbohydrate transport and metabolism]
    pfam00288
    Location:150 → 218
    GHMP_kinases_N; GHMP kinases N terminal domain
    pfam08544
    Location:415 → 488
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:29 → 77
    GalKase_gal_bdg; Galactokinase galactose-binding signature
Nucleotide Protein
Heading Accession and Version

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