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DI49_0185 ancestor homolog: Anc_3.201; saccharomyces cerevisiae ortholog: YBR004C [ Saccharomyces eubayanus ]

Gene ID: 28929323, updated on 21-Dec-2023

Summary

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Gene symbol
DI49_0185
Gene description
ancestor homolog: Anc_3.201; saccharomyces cerevisiae ortholog: YBR004C
Locus tag
DI49_0185
Gene type
protein coding
RNA name
GPI18-like protein
RefSeq status
PROVISIONAL
Organism
Saccharomyces eubayanus (strain: FM1318, nat-host: Cyttaria hariotii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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Genomic context

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See DI49_0185 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_030977.1 (243810..245111, complement)

Chromosome II - NC_030977.1Genomic Context describing neighboring genes Neighboring gene ancestor homolog: Anc_3.203; saccharomyces cerevisiae ortholog: YBR002C Neighboring gene ancestor homolog: Anc_3.202; saccharomyces cerevisiae ortholog: YBR003W Neighboring gene ancestor homolog: Anc_3.200; saccharomyces cerevisiae ortholog: YBR005W Neighboring gene ancestor homolog: Anc_3.199; saccharomyces cerevisiae ortholog: YBR006W

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030977.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Genome Sequence of Saccharomyces eubayanus and the Domestication of Lager-Brewing Yeasts. Baker E, et al. Mol Biol Evol, 2015 Nov. PMID 26269586, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

  • SEUB0B01150

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ancestor homolog: Anc_3.201; saccharomyces cerevisiae ortholog: YBR004C
Names
GPI18-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_030977.1 Reference assembly

    Range
    243810..245111 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018363434.1 → XP_018223563.1  GPI18-like protein [Saccharomyces eubayanus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0L8RNV5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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