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IGKV2-36 immunoglobulin kappa variable 2-36 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 28918, updated on 17-Sep-2024

Summary

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Official Symbol
IGKV2-36provided by HGNC
Official Full Name
immunoglobulin kappa variable 2-36 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:5786
See related
Ensembl:ENSG00000253487 IMGT/GENE-DB:IGKV2-36; AllianceGenome:HGNC:5786
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
O15; IGKV236
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Genomic context

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See IGKV2-36 in Genome Data Viewer
Location:
2p11.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (89295224..89295457, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (89304561..89304794, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (89594981..89595214, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa locus Neighboring gene immunoglobulin kappa variable 3-34 (pseudogene) Neighboring gene immunoglobulin kappa variable 1-35 (pseudogene) Neighboring gene immunoglobulin kappa variable 1-37 (non-functional) Neighboring gene immunoglobulin kappa variable 2-38 (pseudogene)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The human immunoglobulin kappa locus: pseudogenes, unique and repetitive sequences. Schäble K, et al. Biol Chem Hoppe Seyler, 1994 Mar. PMID 8011175

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_000834.1 

    Range
    46170..46403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    89295224..89295457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_012132915.1 Reference GRCh38.p14 PATCHES

    Range
    404050..404283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    89304561..89304794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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