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CH63R_11903 1,3-beta-glucan synthase component FKS1 [ Colletotrichum higginsianum IMI 349063 ]

Gene ID: 28870984, updated on 17-May-2024

Summary

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Gene symbol
CH63R_11903
Gene description
1,3-beta-glucan synthase component FKS1
Locus tag
CH63R_11903
See related
FungiDB:CH63R_11903; VEuPathDB:CH63R_11903
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Colletotrichum higginsianum IMI 349063 (strain: IMI 349063, nat-host: Brassica rapa subsp. chinensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum destructivum species complex
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Genomic context

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See CH63R_11903 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Sequence:
Chromosome: 8; NC_030960.1 (3173706..3179669, complement)

Chromosome 8 - NC_030960.1Genomic Context describing neighboring genes Neighboring gene Cell wall glucanase Neighboring gene Aminotransferase class I and II Neighboring gene hypothetical protein Neighboring gene Sprt family metallopeptidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030960.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall polysaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1,3-beta-glucan synthase component FKS1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_030960.1 Reference assembly

    Range
    3173706..3179669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018306877.1 → XP_018153718.1  1,3-beta-glucan synthase component FKS1 [Colletotrichum higginsianum IMI 349063]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1B7XZM4, A0A4T0VPI3, H1VLD6
Nucleotide Protein
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