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SSB1 SSB1 [ Nakaseomyces glabratus ]

Gene ID: 2886843, updated on 19-Jun-2024

Summary

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Gene symbol
SSB1
Gene description
SSB1
Locus tag
GVI51_C05137
See related
FungiDB:GVI51_C05137; VEuPathDB:GVI51_C05137
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
Old locus tag
CAGL0C05379g
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Genomic context

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See SSB1 in Genome Data Viewer
Location:
chromosome: C
Exon count:
1
Sequence:
Chromosome: C; NC_088953.1 (545969..547810, complement)

Chromosome C - NC_088953.1Genomic Context describing neighboring genes Neighboring gene RTG1 Neighboring gene HST1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088953.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • CAGL0C05379g
    Heat shock protein

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SSB1
XP_445408.1
  • CAGL0C05379g
    Heat shock protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_088953.1 Reference assembly

    Range
    545969..547810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_445408.1 → XP_445408.1  SSB1 [Nakaseomyces glabratus]

    See identical proteins and their annotated locations for XP_445408.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q6FWI6, Q876N3
    UniProtKB/TrEMBL
    A0A0W0E230
    Conserved Domains (1) summary
    PTZ00009
    Location:6 → 575
    PTZ00009; heat shock 70 kDa protein; Provisional
Nucleotide Protein
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Gene LinkOut

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