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CH63R_07868 Glycosyltransferase family 4 [ Colletotrichum higginsianum IMI 349063 ]

Gene ID: 28866949, updated on 17-May-2024

Summary

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Gene symbol
CH63R_07868
Gene description
Glycosyltransferase family 4
Locus tag
CH63R_07868
See related
FungiDB:CH63R_07868; VEuPathDB:CH63R_07868
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Colletotrichum higginsianum IMI 349063 (strain: IMI 349063, nat-host: Brassica rapa subsp. chinensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum destructivum species complex
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Genomic context

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See CH63R_07868 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_030958.1 (3338217..3339707, complement)

Chromosome 5 - NC_030958.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene PHD-finger domain-containing protein Neighboring gene major facilitator superfamily transporter Neighboring gene Transglutaminase-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030958.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Glycosyltransferase family 4

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_030958.1 Reference assembly

    Range
    3338217..3339707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018302842.1 → XP_018157620.1  Glycosyltransferase family 4 [Colletotrichum higginsianum IMI 349063]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A4T0VS37, H1V694
    Conserved Domains (1) summary
    cd06855
    Location:60 → 372
    GT_GPT_euk; UDP-GlcNAc:dolichol-P GlcNAc-1-P transferase (GPT) catalyzes the transfer of GlcNAc-1-P from UDP-GlcNAc to dolichol-P to form GlcNAc-P-P-dolichol. The reaction is the first step in the assembly of dolichol-linked oligosaccharide intermediates and is ...
Nucleotide Protein
Heading Accession and Version

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