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CH63R_07729 chitin synthase [ Colletotrichum higginsianum IMI 349063 ]

Gene ID: 28866810, updated on 26-Jun-2024

Summary

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Gene symbol
CH63R_07729
Gene description
chitin synthase
Locus tag
CH63R_07729
See related
FungiDB:CH63R_07729; VEuPathDB:CH63R_07729
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Colletotrichum higginsianum IMI 349063 (strain: IMI 349063, nat-host: Brassica rapa subsp. chinensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum destructivum species complex
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Genomic context

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See CH63R_07729 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_030958.1 (2818020..2823481, complement)

Chromosome 5 - NC_030958.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Mitochondrial pyruvate dehydrogenase kinase Neighboring gene chitin synthase Neighboring gene Ubiquitin-activating enzyme e1 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030958.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_030958.1 Reference assembly

    Range
    2818020..2823481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018302703.1 → XP_018157481.1  chitin synthase [Colletotrichum higginsianum IMI 349063]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1B7YAD6, A0A4T0VTA8
    Conserved Domains (4) summary
    pfam03142
    Location:1060 → 1568
    Chitin_synth_2; Chitin synthase
    cl02041
    Location:814 → 871
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
    pfam08766
    Location:1728 → 1782
    DEK_C; DEK C terminal domain
    cl22853
    Location:29 → 602
    Motor_domain; Myosin and Kinesin motor domain
Nucleotide Protein
Heading Accession and Version

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