U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CH63R_05611 Glycosyl transferase [ Colletotrichum higginsianum IMI 349063 ]

Gene ID: 28864693, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
CH63R_05611
Gene description
Glycosyl transferase
Locus tag
CH63R_05611
See related
FungiDB:CH63R_05611; VEuPathDB:CH63R_05611
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Colletotrichum higginsianum IMI 349063 (strain: IMI 349063, nat-host: Brassica rapa subsp. chinensis)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum destructivum species complex
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CH63R_05611 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_030957.1 (934779..936380, complement)

Chromosome 4 - NC_030957.1Genomic Context describing neighboring genes Neighboring gene Xenobiotic compound family Neighboring gene glycosyl hydrolase family 3 N terminal domain-containing protein Neighboring gene Pectate lyase L Neighboring gene NmrA-like family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_030957.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Glycosyl transferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_030957.1 Reference assembly

    Range
    934779..936380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018300586.1 → XP_018158436.1  Glycosyl transferase [Colletotrichum higginsianum IMI 349063]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A4T0WJD8, H1VKQ7
    Conserved Domains (1) summary
    pfam11051
    Location:190 → 453
    Mannosyl_trans3; Mannosyltransferase putative
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases