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VFPPC_04052 trehalose-phosphatase [ Pochonia chlamydosporia 170 ]

Gene ID: 28847459, updated on 22-Oct-2023

Summary

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Gene symbol
VFPPC_04052
Gene description
trehalose-phosphatase
Locus tag
VFPPC_04052
Gene type
protein coding
RNA name
trehalose-phosphatase
RefSeq status
PROVISIONAL
Organism
Pochonia chlamydosporia 170 (isolate: 170)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae; Pochonia
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Genomic context

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See VFPPC_04052 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_035792.1 (467312..470158, complement)

Chromosome 3 - NC_035792.1Genomic Context describing neighboring genes Neighboring gene MFS monosaccharide transporter Neighboring gene hypothetical protein Neighboring gene neutral/alkaline nonlysosomal ceramidase Neighboring gene ribokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035792.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biosynthesis of Antibiotic Leucinostatins in Bio-control Fungus Purpureocillium lilacinum and Their Inhibition on Phytophthora Revealed by Genome Mining. Wang G, et al. PLoS Pathog, 2016 Jul. PMID 27416025, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
trehalose-phosphatase
XP_018144547.1
  • similar to Coccidioides immitis RS XP_001248276.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_035792.1 Reference assembly

    Range
    467312..470158 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018283465.1 → XP_018144547.1  trehalose-phosphatase [Pochonia chlamydosporia 170]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A179FQQ5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases