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VFPPC_03550 chitin synthase 6 [ Pochonia chlamydosporia 170 ]

Gene ID: 28847036, updated on 10-Oct-2024

Summary

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Gene symbol
VFPPC_03550
Gene description
chitin synthase 6
Locus tag
VFPPC_03550
Gene type
protein coding
RNA name
chitin synthase 6
RefSeq status
PROVISIONAL
Organism
Pochonia chlamydosporia 170 (isolate: 170)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae; Pochonia
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Genomic context

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See VFPPC_03550 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_035791.1 (4969326..4975055)

Chromosome 2 - NC_035791.1Genomic Context describing neighboring genes Neighboring gene chitin synthase 6 Neighboring gene hypothetical protein Neighboring gene ribosome biogenesis protein Urb1 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035791.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biosynthesis of Antibiotic Leucinostatins in Bio-control Fungus Purpureocillium lilacinum and Their Inhibition on Phytophthora Revealed by Genome Mining. Wang G, et al. PLoS Pathog, 2016 Jul. PMID 27416025, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
chitin synthase 6
XP_018147752.1
  • similar to Aspergillus terreus NIH2624 XP_001208683.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_035791.1 Reference assembly

    Range
    4969326..4975055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018283042.1 → XP_018147752.1  chitin synthase 6 [Pochonia chlamydosporia 170]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A179G006
    Conserved Domains (4) summary
    cd14879
    Location:29 → 768
    MYSc_Myo17; class XVII myosin, motor domain
    pfam00173
    Location:951 → 1010
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
    pfam03142
    Location:1205 → 1713
    Chitin_synth_2; Chitin synthase
    pfam08766
    Location:1804 → 1857
    DEK_C; DEK C terminal domain
Nucleotide Protein
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Molecular Biology Databases