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YBX1 Y-box binding protein 1 [ Bos taurus (domestic cattle) ]

Gene ID: 287023, updated on 4-Oct-2024

Summary

Official Symbol
YBX1provided by VGNC
Official Full Name
Y-box binding protein 1provided by VGNC
Primary source
VGNC:VGNC:50233
See related
Ensembl:ENSBTAG00000017368
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
YB1; NSEP1
Orthologs
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Genomic context

See YBX1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (103520069..103539604, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene prolyl 3-hydroxylase 1 Neighboring gene claudin 19 Neighboring gene peptidylprolyl isomerase H Neighboring gene TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L Neighboring gene coiled-coil domain containing 30

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC127824

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
Y-box-binding protein 1
Names
CBF-A
CCAAT-binding transcription factor I subunit A
DBPB
DNA-binding protein B
EFI-A
Y-box transcription factor
YB-1
enhancer factor I subunit A
nuclease-sensitive element-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174815.2NP_777240.1  Y-box-binding protein 1

    See identical proteins and their annotated locations for NP_777240.1

    Status: PROVISIONAL

    Source sequence(s)
    BC105363
    UniProtKB/Swiss-Prot
    P67808, Q2KJF8
    UniProtKB/TrEMBL
    A0AAF6Z3R0
    Related
    ENSBTAP00000023094.6, ENSBTAT00000023094.6
    Conserved Domains (1) summary
    pfam00313
    Location:59128
    CSD; 'Cold-shock' DNA-binding domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    103520069..103539604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)