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AWOD_RS19530 chondroitin lyase [ Aliivibrio wodanis ]

Gene ID: 28543405, updated on 22-Oct-2017

Summary

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Gene symbol
AWOD_RS19530
Gene description
chondroitin lyase
Locus tag
AWOD_RS19530
Gene type
protein coding
Organism
Aliivibrio wodanis
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio
Old locus tag
AWOD_II_1150
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Genomic context

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Location:
chromosome: 2

2 - NZ_LN554847.1Genomic Context describing neighboring genes Neighboring gene polysaccharide lyase family 7 protein Neighboring gene NAD(P)-dependent oxidoreductase Neighboring gene chondroitin lyase Neighboring gene cupin domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LN554847.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
chondroitin lyase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LN554847.1 Reference assembly

    Range
    1308846..1310996 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_045104346.1 chondroitin lyase [Aliivibrio wodanis]

    UniProtKB/TrEMBL
    A0A090I7J9
    Conserved Domains (2) summary
    pfam07940
    Location:355 → 625
    Hepar_II_III; Heparinase II/III-like protein
    cl00179
    Location:71 → 254
    AlgLyase; Alginate Lyase A1-III; enzymatically depolymerizes alginate, a complex copolymer of beta-D-mannuronate and alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic bond.
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases