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PTO_RS02560 mandelate racemase/muconate lactonizing enzyme family protein [ Picrophilus oshimae DSM 9789 ]

Gene ID: 2844873, updated on 22-Oct-2024

Summary

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Gene symbol
PTO_RS02560
Gene description
mandelate racemase/muconate lactonizing enzyme family protein
Locus tag
PTO_RS02560
Gene type
protein coding
Organism
Picrophilus oshimae DSM 9789 (strain: DSM 9790, type-material: type strain of Picrophilus torridus)
Lineage
Archaea; Methanobacteriati; Thermoplasmatota; Thermoplasmata; Thermoplasmatales; Picrophilaceae; Picrophilus
Old locus tag
PTO0485
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Genomic context

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Sequence:
NC_005877.1 (513221..514396, complement)

NC_005877.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene THUMP domain-containing protein Neighboring gene NADPH-dependent FMN reductase Neighboring gene V-type ATP synthase subunit I Neighboring gene V-type ATP synthase subunit H

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005877.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase. Reher M, et al. J Bacteriol, 2010 Feb. PMID 20023024, Free PMC Article
  2. The enolase superfamily: a general strategy for enzyme-catalyzed abstraction of the alpha-protons of carboxylic acids. Babbitt PC, et al. Biochemistry, 1996 Dec 24. PMID 8987982
  3. Divergent evolution in the enolase superfamily: the interplay of mechanism and specificity. Gerlt JA, et al. Arch Biochem Biophys, 2005 Jan 1. PMID 15581566
  4. Genome sequence of Picrophilus torridus and its implications for life around pH 0. Fütterer O, et al. Proc Natl Acad Sci U S A, 2004 Jun 15. PMID 15184674, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Gluconate dehydratase (GAD) is a homooctamer of 44-kDa subunits, encoded by Pto0485.
    Title: The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
mandelate racemase/muconate lactonizing enzyme family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005877.1 Reference assembly

    Range
    513221..514396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011177286.1 mandelate racemase/muconate lactonizing enzyme family protein [Picrophilus oshimae]

    See identical proteins and their annotated locations for WP_011177286.1

    UniProtKB/Swiss-Prot
    Q6L1T2
    Conserved Domains (2) summary
    COG4948
    Location:1 → 375
    RspA; L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily [Cell wall/membrane/envelope biogenesis, General function prediction only]
    cd03316
    Location:3 → 360
    MR_like; Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6L1T2.1

Gene LinkOut

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