DCPS decapping enzyme, scavenger [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: DCPSprovided by VGNC
Official Full Name: decapping enzyme, scavengerprovided by VGNC
Primary source: VGNC:VGNC:27922
See related: BGD:BT24401
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: HINT-5
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 29

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	29	NC_037356.1 (29649018..29691817)

Chromosome 29 - NC_037356.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:: NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA 7-methylguanosine cap binding	IEA Inferred from Electronic Annotation more info	PubMed
enables hydrolase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in deadenylation-dependent decapping of nuclear-transcribed mRNA	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in P-body	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: m7GpppX diphosphatase

Names: DCS-1; decapping scavenger enzyme; hint-related 7meGMP-directed hydrolase; histidine triad nucleotide-binding protein 5; histidine triad protein member 5; mRNA decapping enzyme; scavenger mRNA-decapping enzyme DcpS

NP_777120.2

EC 3.6.1.59

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_174695.3 → NP_777120.2 m7GpppX diphosphatase

See identical proteins and their annotated locations for NP_777120.2

Status: PROVISIONAL

Source sequence(s)

BC140689

UniProtKB/Swiss-Prot

Q8MJJ7

UniProtKB/TrEMBL

A5D7U9

Conserved Domains (3) summary

COG5075
Location:47 → 321

COG5075; Uncharacterized conserved protein [Function unknown]

pfam05652
Location:45 → 146

DcpS; Scavenger mRNA decapping enzyme (DcpS) N-terminal

pfam11969
Location:175 → 282

DcpS_C; Scavenger mRNA decapping enzyme C-term binding