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PAOX polyamine oxidase [ Bos taurus (domestic cattle) ]

Gene ID: 282639, updated on 17-Aug-2024

Summary

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Official Symbol
PAOXprovided by VGNC
Official Full Name
polyamine oxidaseprovided by VGNC
Primary source
VGNC:VGNC:32570
See related
Ensembl:ENSBTAG00000018321
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See PAOX in Genome Data Viewer
Location:
chromosome: 26
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (25602015..25629449, complement)

Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene sortilin related VPS10 domain containing receptor 3 Neighboring gene scavenger receptor cysteine-rich domain-containing protein SCART1 Neighboring gene olfactory receptor family 6 subfamily AE member 1 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene shadow of prion protein Neighboring gene mitochondrial ribosome associated GTPase 1 Neighboring gene enoyl-CoA hydratase, short chain 1 Neighboring gene fucose mutarotase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning, sequencing, and heterologous expression of the murine peroxisomal flavoprotein, N1-acetylated polyamine oxidase. Wu T, et al. J Biol Chem, 2003 Jun 6. PMID 12660232
  2. Cloning of the bovine prion-like Shadoo (SPRN) gene by comparative analysis of the predicted genomic locus. Uboldi C, et al. Mamm Genome, 2006 Nov. PMID 17091316
  3. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  4. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  5. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyamine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal N(1)-acetyl-spermine/spermidine oxidase
Names
peroxisomal N1-acetyl-spermine/spermidine oxidase
NP_001013620.2
XP_005225507.2
XP_005225508.2
XP_010818099.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013602.2 → NP_001013620.2  peroxisomal N(1)-acetyl-spermine/spermidine oxidase

    See identical proteins and their annotated locations for NP_001013620.2

    Status: PROVISIONAL

    Source sequence(s)
    DQ058607
    UniProtKB/Swiss-Prot
    Q4PS79, Q865R1
    UniProtKB/TrEMBL
    A4IFI4
    Related
    ENSBTAP00000048799.3, ENSBTAT00000057083.3
    Conserved Domains (2) summary
    PLN02568
    Location:15 → 498
    PLN02568; polyamine oxidase
    pfam13450
    Location:44 → 88
    NAD_binding_8; NAD(P)-binding Rossmann-like domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    25602015..25629449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005225451.4 → XP_005225508.2  peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X3

    UniProtKB/TrEMBL
    A0AAA9SBP6, A0AAA9TBR3
    Related
    ENSBTAP00000094122.1, ENSBTAT00000132748.1
    Conserved Domains (1) summary
    cl27535
    Location:155 → 638
    Amino_oxidase; Flavin containing amine oxidoreductase

  2. XM_010819797.4 → XP_010818099.2  peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1

    UniProtKB/TrEMBL
    A0AAA9SBP6
    Conserved Domains (1) summary
    cl27535
    Location:155 → 609
    Amino_oxidase; Flavin containing amine oxidoreductase

  3. XM_005225450.5 → XP_005225507.2  peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X2

    UniProtKB/TrEMBL
    A0AAA9SBP6
    Conserved Domains (1) summary
    cl27535
    Location:155 → 639
    Amino_oxidase; Flavin containing amine oxidoreductase
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q865R1.3 GenPept UniProtKB/Swiss-Prot:Q865R1

Gene LinkOut

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Molecular Biology Databases
Research Materials