U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC25A1 solute carrier family 25 member 1 [ Bos taurus (domestic cattle) ]

Gene ID: 282476, updated on 4-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
SLC25A1provided by VGNC
Official Full Name
solute carrier family 25 member 1provided by VGNC
Primary source
VGNC:VGNC:34741
See related
BGD:BT11544; Ensembl:ENSBTAG00000008528
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Annotation information
Annotation category: suggests misassembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SLC25A1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (72616941..72619791, complement)

Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene testis specific serine kinase 2 Neighboring gene ess-2 splicing factor homolog Neighboring gene goosecoid homeobox 2 Neighboring gene histone cell cycle regulator Neighboring gene chromosome 17 C22orf39 homolog Neighboring gene mitochondrial ribosomal protein L40

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Cloning and sequencing of the bovine cDNA encoding the mitochondrial tricarboxylate carrier protein. Iacobazzi V, et al. Biochim Biophys Acta, 1996 Oct 2. PMID 8865808
  2. Novel reconstitution and enzymatic assay of the mitochondrial tricarboxylate carrier. Lüthy R, et al. Anal Biochem, 1989 Mar. PMID 2729553
  3. Tricarboxylate carrier of bovine liver mitochondria. Purification and reconstitution. Claeys D, et al. J Biol Chem, 1989 Sep 5. PMID 2549027
  4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial citrate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tricarboxylate transport protein, mitochondrial
Names
CTP
citrate transport protein
solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
tricarboxylate carrier protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174656.2 → NP_777081.1  tricarboxylate transport protein, mitochondrial precursor

    See identical proteins and their annotated locations for NP_777081.1

    Status: PROVISIONAL

    Source sequence(s)
    X97773
    UniProtKB/Swiss-Prot
    P79110
    UniProtKB/TrEMBL
    F1MXY8
    Conserved Domains (2) summary
    PTZ00169
    Location:30 → 304
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:24 → 114
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    72616941..72619791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015475639.3 → XP_015331125.2  tricarboxylate transport protein, mitochondrial

    UniProtKB/TrEMBL
    F1MXY8
    Related
    ENSBTAP00000011242.6, ENSBTAT00000011242.7
    Conserved Domains (1) summary
    pfam00153
    Location:21 → 111
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P79110.1 GenPept UniProtKB/Swiss-Prot:P79110

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials